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계열Process / pipelineProcess / pipeline
기원 연도2004–20072011–2015
창시자Colella et al. (QuantiSNP); Fridlyand et al. (HMM-based Bayesian CNV)Navin et al. (single-cell sequencing for CNV); Garvin et al. (Ginkgo tool, 2015)
유형Probabilistic genomic analysis pipelineComputational genomics pipeline
원전Colella, S., Yau, C., Taylor, J. M., Mirza, G., Butler, H., Clouston, P., Bassett, A. S., Seller, A., Holmes, C. C., & Ragoussis, J. (2007). QuantiSNP: an Objective Bayes Hidden-Markov Model to detect and accurately map copy number variation using SNP genotyping data. Nucleic Acids Research, 35(6), 2013–2025. DOI ↗Garvin, T., Aboukhalil, R., Kendall, J., Baslan, T., Atwal, G. S., Hicks, J., Wigler, M., & Schatz, M. C. (2015). Interactive analysis and assessment of single-cell copy-number variations. Nature Methods, 12(11), 1058–1060. link ↗
별칭Bayesian CNV analysis, Bayesian CNV calling, probabilistic CNV detection, Bayesian HMM-CNVscCNV analysis, single-cell CNV, scCNA analysis, single-cell copy number aberration analysis
관련66
요약Bayesian copy number variation (CNV) analysis is a probabilistic framework for detecting genomic segments where an individual's DNA copy count deviates from the diploid norm. By placing prior distributions over copy-number states and updating them with array CGH, SNP array, or sequencing read-depth evidence, the approach yields posterior probabilities for each copy-number state along the genome, providing statistically principled uncertainty quantification that frequentist segmentation methods lack.Single-cell copy number variation (scCNV) analysis detects gains and losses of genomic segments within individual cells, enabling researchers to resolve intratumor heterogeneity, reconstruct clonal evolution, and distinguish malignant from normal cells at single-cell resolution. It can be applied to single-cell whole-genome sequencing data directly or inferred from read-depth signals in scRNA-seq or scATAC-seq experiments.
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ScholarGate방법 비교: Bayesian Copy Number Variation Analysis · Single-cell Copy Number Variation Analysis. 2026-06-18에 다음에서 검색함: https://scholargate.app/ko/compare