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| McDonald-Kreitmanテスト× | HKAテスト× | |
|---|---|---|
| 分野 | 遺伝学 | 遺伝学 |
| 系統 | Process / pipeline | Process / pipeline |
| 提唱年≠ | 1991 | 1987 |
| 提唱者≠ | James McDonald & Martin Kreitman | Richard Hudson, Martin Kreitman & Montserrat Aguade |
| 種類≠ | Hypothesis test | Statistical test |
| 原典≠ | McDonald, J. H., & Kreitman, M. (1991). Adaptive protein evolution at the Adh locus in Drosophila. Nature, 351(6328), 652–654. DOI ↗ | Hudson, R. R., Kreitman, M., & Aguadé, M. (1987). A test of neutral molecular evolution based on nucleotide data. Genetics, 116(1), 153–159. DOI ↗ |
| 別名 | MK test, Positive selection test | HKA test, Polymorphism divergence test |
| 関連 | 4 | 4 |
| 概要≠ | The McDonald-Kreitman (MK) test is a statistical method for detecting adaptive evolution by comparing ratios of synonymous and nonsynonymous substitutions within and between species. Developed by James McDonald and Martin Kreitman in 1991, this test exploits the key insight that neutral mutations accumulate at similar rates within and between species, while adaptive (nonsynonymous) substitutions should be enriched between species if they have been fixed by positive selection. The MK test has become a standard tool in molecular evolutionary biology for identifying genes under natural selection. | The Hudson-Kreitman-Aguade (HKA) test is a statistical method that tests for neutral evolution by comparing levels of within-population polymorphism and between-population divergence at multiple loci. Developed by Hudson, Kreitman, and Aguade in 1987, this test uses the principle that neutral loci should show expected relationships between polymorphism and divergence. Loci deviating from these relationships are candidates for selection. The HKA test is particularly useful for detecting selection in genome-wide surveys because it uses relative comparisons across loci rather than requiring external calibration. |
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