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Rekonstrukcija u krio-elektronskoj mikroskopiji×Homologno modeliranje×Molekularno spajanje×
PodručjeBioinformatikaBioinformatikaBioinformatika
ObiteljProcess / pipelineProcess / pipelineProcess / pipeline
Godina nastanka197519931982
TvoracJoachim FrankAndrej SaliIrwin Kuntz
VrstaImage reconstruction pipelineComparative structure prediction pipelineBinding prediction pipeline
Temeljni izvorFrank, J. (2002). Single-particle imaging of macromolecules by cryo-electron microscopy. Annual Review of Biophysics and Biomolecular Structure, 31, 303-319. DOI ↗Sali, A. & Blundell, T. L. (1993). Comparative protein modelling by satisfaction of spatial restraints. Journal of Molecular Biology, 234(3), 779-815. DOI ↗Kuntz, I. D., Blaney, J. M., Oatley, S. J., Langridge, R., & Ferrin, T. E. (1982). A geometric approach to macromolecule-ligand interactions. Journal of Molecular Biology, 161(2), 269-288. DOI ↗
Drugi nazivicryo-electron microscopy, cryo-EM, single-particle cryo-EMcomparative modeling, template-based modelingprotein-ligand docking, binding prediction
Srodne344
SažetakCryo-electron microscopy (cryo-EM) determines three-dimensional macromolecular structures at atomic or near-atomic resolution by imaging proteins frozen in vitreous ice. Pioneered by Frank, Henderson, and others, this technique has revolutionized structural biology by enabling visualization of large, non-crystallizable complexes and capturing functional conformational states.Homology modeling, also called comparative modeling, predicts the three-dimensional structure of a protein using an experimentally-solved structure of a homologous protein as a template. Introduced by Sali and Blundell in 1993, this method exploits the principle that homologous proteins share similar spatial structures despite differing in amino acid sequence.Molecular docking predicts the preferred binding orientation and affinity of a ligand (small molecule) within a protein binding pocket. Pioneered by Kuntz and colleagues in 1982, this computational method searches conformational space to find energetically favorable ligand-protein complexes, enabling rapid screening of chemical libraries for drug discovery.
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ScholarGateUsporedite metode: Cryo-EM Reconstruction · Homology Modeling · Molecular Docking. Preuzeto 2026-06-20 s https://scholargate.app/hr/compare