Process / pipelineBayesian inference
SIAR Mixing Model
The Stable Isotope Analysis in R (SIAR) mixing model is a Bayesian framework for estimating the proportional contributions of dietary sources to a consumer, using stable isotope ratios. Developed by Parnell and colleagues (2010) and implemented in the R package siar (and its successor MixSIAR), this method integrates isotopic data from potential food sources and consumers to infer diets. It accounts for uncertainty in isotope fractionation (the shift in isotope ratios between diet and tissue) and natural variation among source populations, producing probability distributions rather than point estimates of diet composition.
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Sources
- Parnell, A. C., Inger, R., Bearhop, S., & Jackson, A. L. (2010). Source partitioning using stable isotopes: coping with too much variation. PLoS ONE, 5(3), e9672. DOI: 10.1371/journal.pone.0009672 ↗
- Jackson, A. L., Inger, R., Parnell, A. C., & Bearhop, S. (2011). Comparing isotopic niche widths among sympatric species: the role of phylogenetic relatedness. Ecology Letters, 14(8), 841-851. DOI: 10.1111/j.1461-0248.2011.01651.x ↗
- Phillips, D. L., Inger, R., Bearhop, S., Jackson, A. L., Moore, J. W., Parnell, A. C., Semmens, B. X., & Ward, E. J. (2014). Best practices for use of stable isotope mixing models in food-web studies. Canadian Journal of Zoology, 92(10), 823-835. DOI: 10.1139/cjz-2014-0127 ↗