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Analiza metabolomicii celulelor unice×Analiza de îmbogățire a căilor metabolice×
DomeniuBioinformaticăBioinformatică
FamilieProcess / pipelineProcess / pipeline
Anul apariției2013–2021 (emerging field; major methods established ~2019–2021)2003–2005
Autorul originalMultiple groups; key early platforms: Alexandrov lab (SpaceM), Bhatt/Bhattacharya groupsMootha et al. (2003); systematised by Subramanian et al. (2005)
TipAnalytical pipelineStatistical functional annotation method
Sursa seminalăRappez, L., Stadler, M., Triana, S., Gathungu, R. M., Ovchinnikova, K., Phapale, P., Heikenwalder, M., & Alexandrov, T. (2021). SpaceM reveals metabolic states of single cells. Nature Methods, 18(7), 799–805. link ↗Subramanian, A., Tamayo, P., Mootha, V. K., Mukherjee, S., Ebert, B. L., Gillette, M. A., Paulovich, A., Pomeroy, S. L., Golub, T. R., Lander, E. S., & Mesirov, J. P. (2005). Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles. Proceedings of the National Academy of Sciences, 102(43), 15545–15550. DOI ↗
Denumiri alternativescMetabolomics, single-cell metabolic profiling, single-cell mass spectrometry metabolomics, SC-MS metabolomicsPEA, overrepresentation analysis, ORA, functional enrichment analysis
Înrudite46
RezumatSingle-cell metabolomics analysis measures the small-molecule metabolite content of individual cells, revealing cell-to-cell metabolic heterogeneity that bulk methods obscure by averaging. Rooted in mass spectrometry and microfluidics advances, it enables researchers to map metabolic states across cell populations, identify rare subpopulations, and link metabolic phenotypes to cellular function — providing a functional complement to transcriptomics and proteomics at single-cell resolution.Pathway enrichment analysis (PEA) is a statistical approach that takes a list of genes or proteins of interest — typically derived from a differential expression or proteomics experiment — and identifies which pre-defined biological pathways or functional gene sets are represented more often than expected by chance. By mapping individual molecular changes onto curated pathway knowledge bases such as KEGG, Gene Ontology, or Reactome, PEA translates long gene lists into interpretable biological processes, making it a central tool in the post-analysis of high-throughput omics experiments.
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  1. v1
  2. 2 Surse
  3. PUBLISHED

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ScholarGateCompară metode: Single-cell metabolomics analysis · Pathway Enrichment Analysis. Preluat la 2026-06-18 de pe https://scholargate.app/ro/compare