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Koalescences teorija×LD bloku analīze×Selection Sweep (Tajima's D)×
NozareĢenētikaĢenētikaĢenētika
SaimeProcess / pipelineProcess / pipelineProcess / pipeline
Izcelsmes gads198220021989
AutorsJohn KingmanShaun Gabriel & Eric LanderFumio Tajima
TipsStochastic process modelHaplotype analysis methodNeutrality test
PirmavotsKingman, J. F. C. (1982). The coalescent. Stochastic Processes and their Applications, 13(3), 235–248. DOI ↗Gabriel, S. B., Schaffner, S. F., Nguyen, H., Moore, J. M., Roy, J., Blumenstiel, B., & Lander, E. S. (2002). The structure of haplotype blocks in the human genome. Science, 296(5576), 2225–2229. DOI ↗Tajima, F. (1989). Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics, 123(3), 585–595. DOI ↗
Citi nosaukumiKingman Coalescent, n-coalescentHaplotype block analysis, LD mapping, Block structure analysisTajima's D test, Selective sweep analysis, Neutrality test
Saistītās454
KopsavilkumsCoalescent theory is a probabilistic framework that traces the genealogical history of DNA sequences backward in time to their most recent common ancestor. Developed by John Kingman in 1982, this method forms the foundation of modern population genetics, enabling researchers to understand demographic events, estimate genetic parameters, and reconstruct evolutionary histories from modern genetic data.Linkage disequilibrium (LD) block analysis is a genomic method that partitions the human genome into distinct haplotype blocks—regions of limited recombination where variants are in strong statistical association. First systematically described by Gabriel and colleagues in 2002, this approach reveals the underlying structure of genetic variation and enables efficient genomic studies by reducing the number of variants needed to capture common diversity. LD block analysis forms the foundation of genome-wide association study (GWAS) design and modern population genetics.Tajima's D is a statistical test designed to detect selective sweeps—recent, rapid fixation of advantageous mutations—from patterns of genetic variation in DNA sequences. Developed by Fumio Tajima in 1989, this test measures deviations from neutrality by comparing different measures of DNA sequence diversity. A significant Tajima's D value indicates departure from neutral evolution, suggesting positive selection, population structure, or demographic events.
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ScholarGateSalīdzināt metodes: Coalescent Theory · LD Block Analysis · Selection Sweep (Tajima's D). Izgūts 2026-06-19 no https://scholargate.app/lv/compare