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Llamada de variantes×Alineación de Secuencias×
CampoBioinformáticaBioinformática
FamiliaProcess / pipelineProcess / pipeline
Año de origen2009–2010 (modern high-throughput era)1970 (global alignment); 1981 (local alignment)
Autor originalLi et al. (SAMtools/bcftools, 2009); McKenna et al. (GATK, 2010)Saul B. Needleman & Christian D. Wunsch (global); Temple F. Smith & Michael S. Waterman (local)
TipoComputational genomics pipelineComputational sequence analysis technique
Fuente seminalMcKenna, A., Hanna, M., Banks, E., Sivachenko, A., Cibulskis, K., Kernytsky, A., ... & DePristo, M. A. (2010). The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data. Genome Research, 20(9), 1297–1303. DOI ↗Needleman, S. B., & Wunsch, C. D. (1970). A general method applicable to the search for similarities in the amino acid sequence of two proteins. Journal of Molecular Biology, 48(3), 443–453. DOI ↗
AliasSNP calling, genotyping from sequencing, mutation detection, variant detectionpairwise alignment, multiple sequence alignment, MSA, sequence comparison
Relacionados66
ResumenVariant calling is the computational process of identifying positions in a sequenced genome that differ from a reference sequence — including single nucleotide polymorphisms (SNPs), small insertions and deletions (indels), and structural variants. It transforms aligned sequencing reads into an interpretable catalogue of genetic differences, forming the foundation for population genetics, disease-gene discovery, and clinical genomics applications.Sequence alignment is a foundational bioinformatics technique that arranges two or more DNA, RNA, or protein sequences to reveal regions of similarity, infer evolutionary relationships, identify functional domains, and map sequencing reads to reference genomes. It underpins virtually every downstream genomic analysis, from variant calling and gene expression quantification to phylogenetics and structural annotation.
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ScholarGateComparar métodos: Variant Calling · Sequence Alignment. Recuperado el 2026-06-15 de https://scholargate.app/es/compare