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Análisis de Variación del Número de Copias en Series Temporales×Llamada de variantes×
CampoBioinformáticaBioinformática
FamiliaProcess / pipelineProcess / pipeline
Año de origen2010s–present2009–2010 (modern high-throughput era)
Autor originalDeveloped from foundational CNV methods (Olshen et al. 2004; Ding et al. 2010) extended to longitudinal tumor genomics frameworksLi et al. (SAMtools/bcftools, 2009); McKenna et al. (GATK, 2010)
TipoComputational genomics pipelineComputational genomics pipeline
Fuente seminalDentro, S. C., et al. (2021). Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes. Cell, 184(8), 2239-2254. link ↗McKenna, A., Hanna, M., Banks, E., Sivachenko, A., Cibulskis, K., Kernytsky, A., ... & DePristo, M. A. (2010). The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data. Genome Research, 20(9), 1297–1303. DOI ↗
Aliaslongitudinal CNV analysis, temporal copy number analysis, time-series CNV profiling, serial CNV analysisSNP calling, genotyping from sequencing, mutation detection, variant detection
Relacionados56
ResumenTime-series copy number variation (CNV) analysis is a computational genomics pipeline that characterizes chromosomal gains and losses across multiple sequential samples from the same individual or tumor. By comparing copy number profiles at successive time points — such as diagnosis, mid-treatment, relapse — it reconstructs the clonal dynamics and evolutionary trajectories driving genome instability, enabling researchers to track how sub-populations expand, contract, or acquire new aberrations over time.Variant calling is the computational process of identifying positions in a sequenced genome that differ from a reference sequence — including single nucleotide polymorphisms (SNPs), small insertions and deletions (indels), and structural variants. It transforms aligned sequencing reads into an interpretable catalogue of genetic differences, forming the foundation for population genetics, disease-gene discovery, and clinical genomics applications.
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ScholarGateComparar métodos: Time-series copy number variation analysis · Variant Calling. Recuperado el 2026-06-18 de https://scholargate.app/es/compare