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Time-series phylogenetic analysis/Evidence
Method evidence record

Time-series phylogenetic analysis

Time-series phylogenetic analysis reconstructs the evolutionary history of organisms or genetic variants using sequences sampled at known time points. By incorporating sampling dates directly into the model, it estimates divergence times, substitution rates, and ancestral relationships on an absolute timescale — making it essential for studying viral outbreaks, ancient DNA dynamics, and rapid microbial evolution.

Sources recorded, not reviewed

Source record

Citations copied verbatim from the method’s source record. No claim-level verification is inferred from them.

Time-Series Phylogenetic Analysis
Taxonomic method record · process-pipeline / bioinformatics
  • Drummond, A. J., & Rambaut, A. (2007). BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evolutionary Biology, 7, 214. · DOI 10.1186/1471-2148-7-214
  • Bouckaert, R., Vaughan, T. G., Barido-Sottani, J., Duchene, S., Fourment, M., Gavryushkina, A., et al. (2019). BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis. PLOS Computational Biology, 15(4), e1006650. · DOI 10.1371/journal.pcbi.1006650
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Curated claims

Claims persisted in the evidence ledger, each with its own assessment.

No curated claims yet

This view does not invent a claim assessment when the ledger has none.

Related methods

Generated from the method graph and shown as machine-suggested relations — no evidence claim is inferred.

Taxonomic bucketBayesian Phylogenetic Analysismachine-suggested · Relational suggestion, not evidence.Taxonomic bucketGenome-wide association studymachine-suggested · Relational suggestion, not evidence.Taxonomic bucketPhylogenetic Analysismachine-suggested · Relational suggestion, not evidence.Taxonomic bucketRNA-seq Differential Expressionmachine-suggested · Relational suggestion, not evidence.Taxonomic bucketSequence Alignmentmachine-suggested · Relational suggestion, not evidence.Taxonomic bucketVariant Callingmachine-suggested · Relational suggestion, not evidence.

Evidence status

Sources recorded, not reviewed

Bibliographic sources are present. Claim-level evidence review has not been performed.

Sources

2 recorded citations, copied from the method source record.

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