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मेटैजिनोमिक बिनिंग×CRISPR स्क्रीन विश्लेषण×
क्षेत्रजैव सूचना विज्ञानजैव सूचना विज्ञान
परिवारProcess / pipelineProcess / pipeline
उद्भव वर्ष20112013
प्रवर्तकJillian BanfieldFeng Zhang
प्रकारSequence assembly and clustering pipelineHigh-throughput genetic screen pipeline
मौलिक स्रोतKang, D. D., Froula, J., Egan, R., & Wang, Z. (2015). MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities. PeerJ, 3, e1165. DOI ↗Shalem, O., Sanjana, N. E., Hartenian, E., Shi, X., Scott, D. A., Mikkelsen, T. S., ... & Zhang, F. (2014). Genome-scale CRISPR-Cas9 knockout screening in human cells. Science, 343(6166), 84-87. DOI ↗
उपनामmetagenomic assembly, genome binning, MAG recoveryCRISPR pooled screen, genetic screen analysis
संबंधित33
सारांशMetagenomic binning partitions assembled contigs from complex microbial communities into distinct genome bins, each representing an individual organism or strain. Pioneered by Banfield and colleagues, this pipeline isolates single-organism genomes (metagenome-assembled genomes or MAGs) from environmental samples without requiring cultivated isolates.CRISPR screen analysis processes data from pooled genetic screens using CRISPR-Cas9 to identify genes required for cell growth, survival, or phenotype in specific conditions. Developed by Zhang, Sanjana, and others, this computational pipeline transforms sequencing readouts of guide RNA abundances into ranked lists of functional genes.
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  3. PUBLISHED

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ScholarGateविधियों की तुलना करें: Metagenomic Binning · CRISPR Screen Analysis. 2026-06-19 को यहाँ से प्राप्त https://scholargate.app/hi/compare