Machine learning-assisted pathway enrichment analysis
Machine learning-assisted pathway enrichment analysis integrates classical statistical pathway enrichment methods — such as over-representation analysis or gene set enrichment analysis — with machine learning algorithms to improve sensitivity, handle high-dimensional omics data, and uncover non-linear biological patterns. The approach moves beyond ranking pathways by p-value alone, using ML models to weight gene contributions, distinguish signal from noise across many samples, and prioritize biologically meaningful pathways in complex datasets.
Kilderegistrering
Citater kopieret ordret fra metodens kilderegistrering. Ingen påstandsniveauverifikation er udledt heraf.
- Chen, E. Y., Tan, C. M., Kou, Y., Duan, Q., Wang, Z., Meirelles, G. V., Clark, N. R., & Ma'ayan, A. (2013). Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool. BMC Bioinformatics, 14, 128. · URL
- Way, G. P., & Greene, C. S. (2018). Extracting a biologically relevant latent space from cancer transcriptomes with variational autoencoders. Pacific Symposium on Biocomputing, 23, 80–91. · URL
Kuraterede påstande
Påstande gemt i bevis-loggen, hver med sin egen vurdering.
Denne visning opfinder ikke en påstandsvurdering, når loggen ingen har.
Relaterede metoder
Genereret fra metodegrafen og vist som maskinelt foreslåede relationer — ingen bevispåstand er udledt.